Noé, Frank: search on Z-Library

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1

Developing Tools for STEM Education: The Foldscope, a Very Inexpensive Monocular Microscope for Biological Research.

Denaro, Frank, Gabriel, Maya, Noe, Arsene, Nyaga, Simon

Journal:

Microscopy and Microanalysis

Year:

2018

Language:

english

File:

PDF, 854 KB

english, 2018

2

Major Histocompatibility Complex (MHC) Class I and MHC Class II Proteins: Conformational Plasticity in Antigen Presentation

Wieczorek, Marek, Abualrous, Esam T., Sticht, Jana, Álvaro-Benito, Miguel, Stolzenberg, Sebastian, Noé, Frank, Freund, Christian

Journal:

Frontiers in Immunology

Year:

2017

Language:

english

File:

PDF, 2.99 MB

english, 2017

3

Molecular mechanism of inhibiting the SARS-CoV-2 cell entry facilitator TMPRSS2 with Camostat and Nafamostat

Hempel, Tim, Raich, LluÃs, Olsson, Simon, Azouz, Nurit P, Klingler, Andrea M, Hoffmann, Markus, PÃ¶hlmann, Stefan, Rothenberg, Marc E, Noe, Frank

Journal:

Chemical Science

Year:

2021

File:

PDF, 13.79 MB

2021

4

OpenPathSampling: A Python framework for path sampling simulations. II. Building and customizing path ensembles and sample schemes

Swenson, David, Prinz, Jan-Hendrik, Noé, Frank, Chodera, John Damon, Bolhuis, Peter G.

Journal:

Journal of Chemical Theory and Computation

Year:

2018

Language:

english

File:

PDF, 4.81 MB

english, 2018

5

OpenPathSampling: A Python framework for path sampling simulations. I. Basics

Swenson, David, Prinz, Jan-Hendrik, Noé, Frank, Chodera, John Damon, Bolhuis, Peter G.

Journal:

Journal of Chemical Theory and Computation

Year:

2018

Language:

english

File:

PDF, 2.65 MB

english, 2018

6

HTMD: High-throughput molecular dynamics for molecular discovery

Doerr, Stefan, Harvey, Matthew J., Noé, Frank, De Fabritiis, Gianni

Journal:

Journal of Chemical Theory and Computation

Year:

2016

Language:

english

File:

PDF, 1.98 MB

english, 2016

7

Markov models of molecular kinetics: Generation and validation

Prinz, Jan-Hendrik, Wu, Hao, Sarich, Marco, Keller, Bettina, Senne, Martin, Held, Martin, Chodera, John D., Schütte, Christof, Noé, Frank

Journal:

The Journal of Chemical Physics

Year:

2011

Language:

english

File:

PDF, 1.83 MB

english, 2011

8

Time-lagged autoencoders: Deep learning of slow collective variables for molecular kinetics

Wehmeyer, Christoph, Noé, Frank

Journal:

The Journal of Chemical Physics

Year:

2018

Language:

english

File:

PDF, 6.64 MB

english, 2018

9

Beating the Millisecond Barrier in Molecular Dynamics Simulations

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 81 KB

english, 2015

10

Multiensemble Markov models of molecular thermodynamics and kinetics

Wu, Hao, Paul, Fabian, Wehmeyer, Christoph, Noé, Frank

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 2.01 MB

english, 2016

11

Probing molecular kinetics with Markov models: metastable states, transition pathways and spectroscopic observables

Prinz, Jan-Hendrik, Keller, Bettina, Noé, Frank

Journal:

Physical Chemistry Chemical Physics

Year:

2011

Language:

english

File:

PDF, 3.13 MB

english, 2011

12

Variational tensor approach for approximating the rare-event kinetics of macromolecular systems

Nüske, Feliks, Schneider, Reinhold, Vitalini, Francesca, Noé, Frank

Journal:

The Journal of Chemical Physics

Year:

2016

Language:

english

File:

PDF, 898 KB

english, 2016

13

Ad26 vaccine protects against SARS-CoV-2 severe clinical disease in hamsters

Tostanoski, Lisa H., Wegmann, Frank, Martinot, Amanda J., Loos, Carolin, McMahan, Katherine, Mercado, Noe B., Yu, Jingyou, Chan, Chi N., Bondoc, Stephen, Starke, Carly E., Nekorchuk, Michael, Busman-S

Journal:

Nature Medicine

Year:

2020

File:

PDF, 8.34 MB

2020

14

VAMPnets for deep learning of molecular kinetics

Mardt, Andreas, Pasquali, Luca, Wu, Hao, Noé, Frank

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 4.15 MB

english, 2018

15

Complete protein–protein association kinetics in atomic detail revealed by molecular dynamics simulations and Markov modelling

Plattner, Nuria, Doerr, Stefan, De Fabritiis, Gianni, Noé, Frank

Journal:

Nature Chemistry

Year:

2017

Language:

english

File:

PDF, 3.53 MB

english, 2017

16

On the Approximation Quality of Markov State Models

Sarich, Marco, Noé, Frank, Schütte, Christof

Journal:

Multiscale Modeling and Simulation

Year:

2010

Language:

english

File:

PDF, 435 KB

english, 2010

17

Identification of slow molecular order parameters for Markov model construction

Pérez-Hernández, Guillermo, Paul, Fabian, Giorgino, Toni, De Fabritiis, Gianni, Noé, Frank

Journal:

The Journal of Chemical Physics

Year:

2013

Language:

english

File:

PDF, 1.91 MB

english, 2013

18

Explicit Spatiotemporal Simulation of Receptor-G Protein Coupling in Rod Cell Disk Membranes

Schöneberg, Johannes, Heck, Martin, Hofmann, Klaus Peter, Noé, Frank

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 2.63 MB

english, 2014

19

Data-Driven Model Reduction and Transfer Operator Approximation

Klus, Stefan, Nüske, Feliks, Koltai, Péter, Wu, Hao, Kevrekidis, Ioannis, Schütte, Christof, Noé, Frank

Journal:

Journal of Nonlinear Science

Year:

2018

Language:

english

File:

PDF, 2.29 MB

english, 2018

20

Negotiations over Grooming in Wild Vervet Monkeys (Chlorocebus pygerythrus)

Waal, Erica, Spinelli, Martina, Bshary, Redouan, Ros, Albert Frank Huascar, Noë, Ronald

Journal:

International Journal of Primatology

Year:

2013

Language:

english

File:

PDF, 367 KB

english, 2013

21

The student writing toolkit: enhancing undergraduate teaching of scientific writing in the biological sciences

Dirrigl, Frank J., Noe, Mark

Journal:

Journal of Biological Education

Year:

2014

Language:

english

File:

PDF, 274 KB

english, 2014

22

Efficient Bayesian estimation of Markov model transition matrices with given stationary distribution

Trendelkamp-Schroer, Benjamin, Noé, Frank

Journal:

The Journal of Chemical Physics

Year:

2013

Language:

english

File:

PDF, 702 KB

english, 2013

23

Hierarchical analysis of conformational dynamics in biomolecules: Transition networks of metastable states

Noé, Frank, Horenko, Illia, Schütte, Christof, Smith, Jeremy C.

Journal:

The Journal of Chemical Physics

Year:

2007

Language:

english

File:

PDF, 3.65 MB

english, 2007

24

Variational Approach for Learning Markov Processes from Time Series Data

Wu, Hao, Noé, Frank

Journal:

Journal of Nonlinear Science

Year:

2019

Language:

english

File:

PDF, 2.84 MB

english, 2019

25

Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning

Noé, Frank, Olsson, Simon, Köhler, Jonas, Wu, Hao

Journal:

Year:

2019

Language:

english

File:

PDF, 5.47 MB

english, 2019

26

Youth and Leisure. Kenneth Roberts

Journal:

Journal of Leisure Research

Year:

1984

Language:

english

File:

PDF, 226 KB

english, 1984

27

PyEMMA 2: A Software Package for Estimation, Validation, and Analysis of Markov Models

Scherer, Martin K., Trendelkamp-Schroer, Benjamin, Paul, Fabian, Perez-Hernandez, Guillermo, Hoffmann, Moritz, Plattner, Nuria, Wehmeyer, Christoph, Prinz, Jan-Hendrik, Noé, Frank

Journal:

Journal of Chemical Theory and Computation

Year:

2015

Language:

english

File:

PDF, 6.51 MB

english, 2015

28

Preliminary Performance Outcomes among Minority Parents Participating in a Fitness Program

Chavez, Adrian, Vega-López, Sonia, Eckert, Ryan, Tarango, Tony, Ray, Frank, Shaibi, Gabriel, Huberty, Jennifer, Todd, Michael, Crespo, Noe

Journal:

Medicine & Science in Sports & Exercise

Year:

2015

Language:

english

File:

PDF, 207 KB

english, 2015

29

Hierarchical time-lagged independent component analysis: computing slow modes and reaction coordinates for large molecular systems

Pérez-Hérnandez, Guillermo, Noé, Frank

Journal:

Journal of Chemical Theory and Computation

Year:

2016

Language:

english

File:

PDF, 5.02 MB

english, 2016

30

Structural modeling and molecular dynamics simulation of the actin filament

Thomas Splettstoesser, Kenneth C. Holmes, Frank Noé, Jeremy C. Smith

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2011

Language:

english

File:

PDF, 3.74 MB

english, 2011

31

Manganese Kβ X-ray Emission Spectroscopy As a Probe of Metal–Ligand Interactions

Beckwith, Martha A., Roemelt, Michael, Collomb, Marie-Noëlle, DuBoc, Carole, Weng, Tsu-Chien, Bergmann, Uwe, Glatzel, Pieter, Neese, Frank, DeBeer, Serena

Journal:

Inorganic Chemistry

Year:

2011

Language:

english

File:

PDF, 1.24 MB

english, 2011

32

Commute Maps: Separating Slowly Mixing Molecular Configurations for Kinetic Modeling

Noé, Frank, Banisch, Ralf, Clementi, Cecilia

Journal:

Journal of Chemical Theory and Computation

Year:

2016

Language:

english

File:

PDF, 6.26 MB

english, 2016

33

Well-differentiated Pancreatic Neuroendocrine Tumor in a Patient With Familial Atypical Multiple Mole Melanoma Syndrome (FAMMM)

Noë, Michaël, Hackeng, Wenzel M., de Leng, Wendy W.J., Vergeer, Menno, Vleggaar, Frank P., Morsink, Folkert H.M., Wood, Laura D., Hruban, Ralph H., Offerhaus, G. Johan A., Brosens, Lodewijk A.A.

Journal:

American Journal of Surgical Pathology

Year:

2019

File:

PDF, 360 KB

2019

34

Single-shot Ad26 vaccine protects against SARS-CoV-2 in rhesus macaques

Mercado, Noe B., Zahn, Roland, Wegmann, Frank, Loos, Carolin, Chandrashekar, Abishek, Yu, Jingyou, Liu, Jinyan, Peter, Lauren, McMahan, Katherine, Tostanoski, Lisa H., He, Xuan, Martinez, David R., Ru

Journal:

Year:

2020

File:

PDF, 3.50 MB

2020

35

Kinetics of Ligand Receptor Interaction Reveals the Mode of Binding in Cyclic Nucleotide-Activated Proteins

Peuker, Sebastian, Held, Martin, Cukkemane, Abhishek, Noe, Frank, Kaupp, U. Benjamin, Seifert, Reinhard

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 64 KB

english, 2012

36

Reversible Apical Coordination of Imidazole between the Ni(III) and Ni(II) Oxidation States of a Dithiolate Complex: A Process Related to the Ni Superoxide Dismutase

Gennari, Marcello, Orio, Maylis, Pécaut, Jacques, Neese, Frank, Collomb, Marie-Noëlle, Duboc, Carole

Journal:

Inorganic Chemistry

Year:

2010

Language:

english

File:

PDF, 737 KB

english, 2010

37

Predicting the Kinetics of RNA Oligonucleotides Using Markov State Models

Pinamonti, Giovanni, Zhao, Jianbo, Condon, David E., Paul, Fabian, Noè, Frank, Turner, Douglas H., Bussi, Giovanni

Journal:

Journal of Chemical Theory and Computation

Year:

2017

Language:

english

File:

PDF, 1.71 MB

english, 2017

38

Identifying Conformational-Selection and Induced-Fit Aspects in the Binding-Induced Folding of PMI from Markov State Modeling of Atomistic Simulations

Paul, Fabian, Noé, Frank, Weikl, Thomas R.

Journal:

Journal of Physical Chemistry B

Year:

2018

Language:

english

File:

PDF, 3.85 MB

english, 2018

39

Rapid calculation of molecular kinetics using compressed sensing

Litzinger, Florian, Boninsegna, Lorenzo, Wu, Hao, Nüske, Feliks, Patel, Raajen, Baraniuk, Richard, Noé, Frank, Clementi, Cecilia

Journal:

Journal of Chemical Theory and Computation

Year:

2018

Language:

english

File:

PDF, 1.46 MB

english, 2018

40

Efficient Multi-Objective Molecular Optimization in a Continuous Latent Space

Winter, Robin, Montanari, Floriane, Steffen, Andreas, Briem, Hans, Noe, Frank, Clevert, Djork-Arné

Journal:

Chemical Science

Year:

2019

Language:

english

File:

PDF, 5.38 MB

english, 2019

41

Athletes for life: Rationale and methodology of a community- and family-based randomized controlled trial to promote cardiovascular fitness among primarily Latino families

Szeszulski, Jacob, Vega-LÃ³pez, Sonia, Todd, Michael, Ray, Frank, Behar, Alma, Campbell, Maria, Chavez, Adrian, Eckert, Ryan, Lorenzo-Quintero, Anabell, Manrique, Leopoldo Hartmann, Crespo, Noe C.

Journal:

Contemporary Clinical Trials

Year:

2020

Language:

english

File:

PDF, 706 KB

english, 2020

42

PMD tolerance of polarization division multiplex transmission using return-to-zero coding

Noe, Reinhold, Hinz, Stephan, Sandel, David, Wuest, Frank

Journal:

Year:

2001

Language:

english

File:

PDF, 272 KB

english, 2001

43

Investigating the Reaction of N -Carbobenzoxy- O -carbobenzoxy- hydroxylamine with Dimethyl Sulfoxide: Formation of S,S -Dimethyl- N -[(phenylmethoxy)- carbonyl]sulfoximine

Darbeau, Ron W., Alvarez, Noe T., Trahan, Gregory A., Fronczek, Frank R.

Journal:

Journal of Organic Chemistry

Year:

2005

Language:

english

File:

PDF, 125 KB

english, 2005

44

[IEEE 2014 IEEE/PES Transmission & Distribution Conference & Exposition (T&D) - Chicago, IL, USA (2014.4.14-2014.4.17)] 2014 IEEE PES T&D Conference and Exposition - AmpaCity — Advanced superconducting medium voltage system for urban area power supply

Stemmle, Mark, Merschel, Frank, Noe, Mathias, Hobl, Achim

Year:

2014

Language:

english

File:

PDF, 870 KB

english, 2014

45

Projected and hidden Markov models for calculating kinetics and metastable states of complex molecules

Noé, Frank, Wu, Hao, Prinz, Jan-Hendrik, Plattner, Nuria

Journal:

The Journal of Chemical Physics

Year:

2013

Language:

english

File:

PDF, 2.69 MB

english, 2013

46

Protein-peptide association kinetics beyond the seconds timescale from atomistic simulations

Paul, Fabian, Wehmeyer, Christoph, Abualrous, Esam T., Wu, Hao, Crabtree, Michael D., Schöneberg, Johannes, Clarke, Jane, Freund, Christian, Weikl, Thomas R., Noé, Frank

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.27 MB

english, 2017

47

Deflation reveals dynamical structure in nondominant reaction coordinates

Husic, Brooke E., Noé, Frank

Journal:

The Journal of Chemical Physics

Year:

2019

Language:

english

File:

PDF, 2.68 MB

english, 2019

48

Signed online chromatic-dispersion monitoring by synchronous detection of FM-induced arrival-time modulations in the clock-recovery phase-locked loop

Noé, Reinhold, Sandel, David, Bhandare, Suhas, Wüst, Frank, Milivojevic, Biljana, Mirvoda, Vitali

Journal:

Journal of Optical Networking

Year:

2004

Language:

english

File:

PDF, 1.02 MB

english, 2004

49

Synthesis of Thieno[2,3- b ]Pyridinones Acting as Cytoprotectants and as Inhibitors of [ 3 H]Glycine Binding to the N -Methyl- d -aspartate (NMDA) Receptor

Buchstaller, Hans-Peter, Siebert, Carsten D., Steinmetz, Ralf, Frank, Ina, Berger, Michael L., Gottschlich, Rudolf, Leibrock, Joachim, Krug, Michael, Steinhilber, Dieter, Noe, Christian R.

Journal:

Journal of Medicinal Chemistry

Year:

2006

Language:

english

File:

PDF, 202 KB

english, 2006

50

A Comparison of Actin Filament Models by Molecular Dynamics Simulation

Splettstoesser, Thomas, Holmes, Kenneth C., Noé, Frank, Smith, Jeremy C.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 33 KB

english, 2010

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